PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.0B5Q5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 223aa    MW: 24777.1 Da    PI: 8.4836
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.0B5Q5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-1165112454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ +++L
  Araip.0B5Q5  65 SKACREKMRRDRLNDRFLELGSILDPG---RPPKTDKAAILSDAVQLVSQL 112
                  5678**********************8...89***************9999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.25661112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-965112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.94E-865117No hitNo description
Gene3DG3DSA:4.10.280.102.8E-1366125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-1367137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.3E-1067118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:1.20.5.1701.9E-4126161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MGSSENPNWV LDYAYLDDIH SLSDPSNFSW PPPPTSLSAD LHQSLPNSHG PDQSASRKRL  60
RSSGSKACRE KMRRDRLNDR FLELGSILDP GRPPKTDKAA ILSDAVQLVS QLRGEAQKLK  120
ESTENLQEKI NELKAEKNEL RDEKQRLKAE KDSLEKQLKA LNTPPGFLHH PPTLPAVFPH  180
APGQVLGSKL VPFMGYPGVS MWQFLPPAAV DTSQDHVLRP PVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150385e-41AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181384.11e-163PREDICTED: transcription factor ILR3-like
SwissprotQ9FH372e-88ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A151S1391e-103A0A151S139_CAJCA; Transcription factor ILR3
STRINGVIT_12s0059g02650.t014e-94(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16023486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-89bHLH family protein